The Bio.Seq Module: Biological Sequences

The Bio.Seq module provides several data types for handling biological symbols and sequences.

• Biological symbols
  • DNA and RNA nucleotides
  • Amino acids
  • Other functions
• Biological sequences
  • Introduction to the sequence data-types
  • General-purpose sequences
  • Reference sequences
  • Nucleic acid k-mers
• Sequence search
  • Exact search
  • Approximate search
  • Regular expression search
  • Sequence composition
• Sequence records
• Sequence demultiplexing